Intro to Parallel Computing
TMEC 328This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to […]
CCB is happy to provide computational and data science resources for HMS graduate students, postdoctoral fellows, research staff, and faculty across all departments of the HMS quadrangle.
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This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to […]
Pre-requisites: Shell and Intermediate Shell
During this online hands-on workshop, participants will learn: • How to design a bulk RNA-seq experiment • The steps involved in taking raw RNA-sequencing data (Illumina) and generating a count […]
During this online hands-on workshop, participants will learn: • How to design a bulk RNA-seq experiment • The steps involved in taking raw RNA-sequencing data (Illumina) and generating a count (gene expression) matrix • How to compute and assess QC metrics at every step in the workflow • How to automate a simple workflow on […]
In this short seminar we cover some simple but essential rules to use the O2 cluster in the most efficient (and inexpensive) way. Audience: Anyone running jobs in the O2 cluster Prerequisites: Familiarity with the O2 cluster and the Slurm scheduler Cost: None Late Drop/Cancel Fee: None Please contact lingsheng_dong@hms.harvard.edu with any question.
A 2-page Data Management Plan (DMP) is now required as part of the new NIH Data Management & Sharing Policy. The Plan will set you up for long-term research success. The DMPTool is web-based and provides basic templates that can help you construct data management plans. The DMPTool provides you with templates, funder mandates, institutional […]
This year’s annual symposium will focus on recent efforts by quantitative scientists to better understand the complex mechanisms that contribute to health disparities and to develop interventions to reduce or eliminate these disparities. Speakers from Harvard T.H. Chan School of Public Health, Johns Hopkins, Brown University, Drexel University, and the National Institutes of Health will […]
During this online hands-on workshop, participants will learn: • How to design a bulk RNA-seq experiment • The steps involved in taking raw RNA-sequencing data (Illumina) and generating a count (gene expression) matrix • How to compute and assess QC metrics at every step in the workflow • How to automate a simple workflow on […]
The course will cover all levels of MS data, from raw data to identification and quantitation data, up to the statistical interpretation of a typical shotgun MS experiment and will focus on hands-on tutorials. At the end of this course, the participants will be able to manipulate MS data in R and use existing packages […]
The course will cover all levels of MS data, from raw data to identification and quantitation data, up to the statistical interpretation of a typical shotgun MS experiment and will focus on hands-on tutorials. At the end of this course, the participants will be able to manipulate MS data in R and use existing packages […]
The course will cover all levels of MS data, from raw data to identification and quantitation data, up to the statistical interpretation of a typical shotgun MS experiment and will focus on hands-on tutorials. At the end of this course, the participants will be able to manipulate MS data in R and use existing packages […]
Python is a popular scripting language for scientific computing and available across all computer platforms. The course will introduce you to some of the basics of the Python language as well as some of the nuances involved with its use specific to the O2 environment. The goal is to provide users with a foundational level […]