Intro to Git and GitHub
TMEC 328This course introduces Git and GitHub and covers topics including: Getting Started with Git for version control, Using GitHub Desktop effectively, Collaborating with others on GitHub, and Utilizing GitHub Flow […]
CCB is happy to provide computational and data science resources for HMS graduate students, postdoctoral fellows, research staff, and faculty across all departments of the HMS quadrangle.
Please email us for additional information on project collaboration, tool/technology development, educational resources, or any general inquiries.
This course introduces Git and GitHub and covers topics including: Getting Started with Git for version control, Using GitHub Desktop effectively, Collaborating with others on GitHub, and Utilizing GitHub Flow […]
RCBio is a HPC pipeline runner and workflow tool supported by HMS RC consultants. It was first designed for a Neubiology lab and later opened to all O2 users. RCBio helps users to quickly build and run multiple steps data analysis pipeline on a computer cluster. RCBio automatically keeps logs on all job status and […]
Python is a popular scripting language for scientific computing and available across all computer platforms. The course will introduce you to some of the basics of the Python language as well as some of the nuances involved with its use specific to the O2 environment. The goal is to provide users with a foundational level […]
Intermediate O2 is for current O2 users who would like to brush up on their bash skills, learn more advanced file transfer techniques, and unleash some of the powerful features of the SLURM scheduler." Prerequisites: Intro to O2 or proficiency on the O2 cluster
As research grows increasingly more complex, arrangements for data storage and transmission of research data require continuous review and modification. Data storage encompasses not only the specific location where data will be kept and managed, but also aspects of data privacy, data security, data organization, and eventual sharing or reuse. During this short training seminar, […]
O2 Portal is web-based access point to O2 powered by Open OnDemand. This short training teaches you the basic functions of O2 Portal, including file transfer, Slurm job submission and monitoring desktop activities and a few popular applications such as Matlab, Jupyter and Rstudio. Audience: Anyone interested in using the O2 resources for their projects Pre-Requisites: Familiarity […]
Intro to O2 addresses the needs of users who have very little linux experience, and are just getting started with HPC. Time will be devoted to covering linux basics, and […]
Python is a popular scripting language for scientific computing and available across all computer platforms. The course will introduce you to some of the basics of the Python language as well as some of the nuances involved with its use specific to the O2 environment. The goal is to provide users with a foundational level […]
Python is a popular scripting language for scientific computing and available across all computer platforms. The course will introduce you to some of the basics of the Python language as well as some of the nuances involved with its use specific to the O2 environment. The goal is to provide users with a foundational level […]
In this short seminar we cover some simple but essential rules to use the O2 cluster in the most efficient (and inexpensive) way. Audience: Anyone running jobs in the O2 cluster […]
This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to […]
This is a short introduction to Parallel Computing that will include an overview of the basic concepts of parallel programming: from running your job in an embarrassingly parallel way to […]